PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv1_002090_gcco.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 458aa    MW: 52248.5 Da    PI: 6.8451
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv1_002090_gcco.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH421.7e-13227278155
                         CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++++k+L+
  Bv1_002090_gcco.t1 227 QRMTHIAVERNRRRQMNEHLNALRSLMPPS---YVQRGDQASIIGGAIDFVKELE 278
                         79****************************...9******************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.47E-12225282No hitNo description
PROSITE profilePS5088815.72226277IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.66E-17226294IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.6E-11227278IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-14227290IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-11232283IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MEKLQGPINP CIIAEEFEVG WLEEFISNNG GNFKVEDPYY HNTTTEDTSY GDLHYSLPSL  60
EDKMPFLQML QSVEQQQQQH QQQQCHQLMH LEPNFQFLLK LQHQKLNFFP SPEIESCVTT  120
TTTTHNNNHN IDSNNHNNDM IIKNIMDNLQ CHHQGVKSEG EIHQQQQIIS SSGVVETLKC  180
KNSNSSSRSK KSATCCSTST VVVGLKEKRK RKRTTRPAKN KEEVETQRMT HIAVERNRRR  240
QMNEHLNALR SLMPPSYVQR GDQASIIGGA IDFVKELEQM LQSLQAQKRM RQYEENGDVS  300
ISSSSTSSSS NLHYNNIFMA SPSSSFHQLR NQFHSHEEGN GNGNGNGNSI DECMMMRKSN  360
NNEEYSAEKR SDLADIEVVV IQNHVNLKIQ CQRRAGQLLK AIVAFEELRL TVLHLNITSL  420
HALVHYSFNL KIEDDCRLGS ADEVARAVHQ IFSLINLS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1227238RMTHIAVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010688515.10.0PREDICTED: transcription factor bHLH67
SwissprotQ9M1281e-67BH057_ARATH; Transcription factor bHLH57
TrEMBLA0A0J8D7K80.0A0A0J8D7K8_BETVU; Uncharacterized protein
STRINGVIT_15s0048g02510.t017e-94(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46810.12e-63bHLH family protein